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© Arne Elofsson

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Prediction in text file can be found in query.result.txt

The sequence file in FASTA format can be found in seq.fa


Predicted topologies and predicted ΔG values:

Topology
High-resolution image


Consensus prediction (TOPCONS):

Consensus
High-resolution image

Predicted signal peptide and TM-helix positions (position starting from 1):

TOPCONS  ***No signal peptide nor TM-regions predicted***
OCTOPUS  ***No signal peptide nor TM-regions predicted***
Philius  TM1: 200-221
PolyPhobius  TM1: 199-221
SCAMPI  ***No signal peptide nor TM-regions predicted***
SPOCTOPUS  ***No signal peptide nor TM-regions predicted***
PDB-homology  ***No homologous TM proteins detected***

Sequence and predicted topologies: (i: inside the membrane, o: outside of the membrane, M: membrane region, u: non-membrane region but location unkown)

 1                                           41         
Seq.   MTLQQRIQAK TTLYTILNRE YIKGQGHVWT VKNNETGAVS QKNTHELTGG
TOPCONS   
OCTOPUS   
PHILIUS   oooooooooo oooooooooo oooooooooo oooooooooo oooooooooo
PolyPhobius   oooooooooo oooooooooo oooooooooo oooooooooo oooooooooo
SCAMPI   
SPOCTOPUS   
 
 51                                          91         
Seq.   TDTAANGYKN KTNRHVKSTA KSLSHGMSNT NFYRQWKQMK NRCNNPSQPQ
TOPCONS   
OCTOPUS   
PHILIUS   oooooooooo oooooooooo oooooooooo oooooooooo oooooooooo
PolyPhobius   oooooooooo oooooooooo oooooooooo oooooooooo oooooooooo
SCAMPI   
SPOCTOPUS   
 
 101                                         141        
Seq.   YEKYHAKGYD PRWDVFENFM SDMYDTYEEG LTIDRIDGEK GYYPDNCRWA
TOPCONS   
OCTOPUS   
PHILIUS   oooooooooo oooooooooo oooooooooo oooooooooo oooooooooo
PolyPhobius   oooooooooo oooooooooo oooooooooo oooooooooo oooooooooo
SCAMPI   
SPOCTOPUS   
 
 151                                         191        
Seq.   DRNTQQRNMK SNVKINWFGT EMTLVELVEK HGLTNYGMCN QDLRRYQSMG
TOPCONS   
OCTOPUS   
PHILIUS   oooooooooo oooooooooo oooooooooo oooooooooo oooooooooM
PolyPhobius   oooooooooo oooooooooo oooooooooo oooooooooo ooooooooMM
SCAMPI   
SPOCTOPUS   
 
 201                                         241        
Seq.   FSLDMAAVMM VLGFASGVRL LKGSPKAKTV KAGKELYGDV YGTLSDPLSP
TOPCONS   
OCTOPUS   
PHILIUS   MMMMMMMMMM MMMMMMMMMM Miiiiiiiii iiiiiiiiii iiiiiiiiii
PolyPhobius   MMMMMMMMMM MMMMMMMMMM Miiiiiiiii iiiiiiiiii iiiiiiiiii
SCAMPI   
SPOCTOPUS   
 
 251        261        
Seq.   DNLVAMCRTS ELADMEAL
TOPCONS   
OCTOPUS   
PHILIUS   iiiiiiiiii iiiiiiii
PolyPhobius   iiiiiiiiii iiiiiiii
SCAMPI   
SPOCTOPUS